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Prediction of atorvastatin plasmatic concentrations in healthy volunteers using integrated pharmacogenetics sequencing

  • Instituto Nacional de Medicina Genomica Mexico
    ,
  • Universidad Autonoma de Nuevo Leon
    ,
  • Vitagénesis, SA de CV.
    ,
  • Universidad Nacional Autónoma de México
Research Output:
Contribution to journal
Article
Peer-review

Publication metrics

Metrics

Scopus
Citations
SciVal
FWCI
0.87
SciVal
Author count
4
SciVal
Citations
15
SciVal
Paper percentile
67

Abstract

Aim: To use variants found by next-generation sequencing to predict atorvastatin plasmatic concentration profiles (AUC) in healthy volunteers. Subjects & methods: A total of 60 healthy Mexican volunteers were enrolled in this study. We used variants with a predicted functional effect across 20 genes involved in atorvastatin metabolism to construct a regression model using a support vector approach with a radial basis function kernel to predict AUC refining it afterwards in order to explain a greater extent of the variance. Results: The final support vector regression model using 60 variants (including six novel variants) explained 94.52% of the variance in atorvastatin AUC. Conclusion: An integrated analysis of several genes known to intervene in the different steps of metabolism is required to predict atorvastatin's AUC.

Publication Information

Output type

Research Output:
Contribution to journal
Article
Peer-review

Original language

English

Pages from-to (Number of pages)

Pages 121-131 (11 pages)

Journal (Volume, Issue Number)

Pharmacogenomics (Volume 18, Issue 2)

Publication milestones

  • Published - 01/01/2017

Publication status

Published - 01/01/2017

ISSN

1462-2416

Publication IDs

  • Scopus: 85007292387
  • WOS: 000391866700003