Prediction of atorvastatin plasmatic concentrations in healthy volunteers using integrated pharmacogenetics sequencing
- Omar Fernando Cruz-Correa,
- ,
- Hugo Alberto Barrera-Saldaña,
- Xavier Soberón
- Instituto Nacional de Medicina Genomica Mexico,
- Universidad Autonoma de Nuevo Leon,
- Vitagénesis, SA de CV.,
- Universidad Nacional Autónoma de México
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Abstract
Aim: To use variants found by next-generation sequencing to predict atorvastatin plasmatic concentration profiles (AUC) in healthy volunteers. Subjects & methods: A total of 60 healthy Mexican volunteers were enrolled in this study. We used variants with a predicted functional effect across 20 genes involved in atorvastatin metabolism to construct a regression model using a support vector approach with a radial basis function kernel to predict AUC refining it afterwards in order to explain a greater extent of the variance. Results: The final support vector regression model using 60 variants (including six novel variants) explained 94.52% of the variance in atorvastatin AUC. Conclusion: An integrated analysis of several genes known to intervene in the different steps of metabolism is required to predict atorvastatin's AUC.
Publication Information
Output type
Original language
EnglishPages from-to (Number of pages)
Pages 121-131 (11 pages)Journal (Volume, Issue Number)
Pharmacogenomics (Volume 18, Issue 2)Publication milestones
- Published - 01/01/2017
Publication status
ISSN
1462-2416Publication IDs
- Scopus: 85007292387
- WOS: 000391866700003
